Lines Matching refs:seq
21 let mut seq = Vec::with_capacity(51 * (1 << 20)); in main() localVariable
22 io::stdin().read_to_end(&mut seq).unwrap(); in main()
23 let ilen = seq.len(); in main()
25 seq = regex!(">[^\n]*\n|\n").replace_all(&seq, &b""[..]).into_owned(); in main()
26 let clen = seq.len(); in main()
27 let seq_arc = Arc::new(seq.clone()); in main()
42 let seq = seq_arc.clone(); in main() localVariable
44 let future = thread::spawn(move || variant.find_iter(&seq).count()); in main()
61 let mut seq = seq; in main() localVariable
63 seq = re.replace_all(&seq, replacement).into_owned(); in main()
69 println!("\n{}\n{}\n{}", ilen, clen, seq.len()); in main()