1 //===================================================== 2 // File : STL_interface.hh 3 // Author : L. Plagne <laurent.plagne@edf.fr)> 4 // Copyright (C) EDF R&D, lun sep 30 14:23:24 CEST 2002 5 //===================================================== 6 // 7 // This program is free software; you can redistribute it and/or 8 // modify it under the terms of the GNU General Public License 9 // as published by the Free Software Foundation; either version 2 10 // of the License, or (at your option) any later version. 11 // 12 // This program is distributed in the hope that it will be useful, 13 // but WITHOUT ANY WARRANTY; without even the implied warranty of 14 // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 15 // GNU General Public License for more details. 16 // You should have received a copy of the GNU General Public License 17 // along with this program; if not, write to the Free Software 18 // Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. 19 // 20 #ifndef STL_INTERFACE_HH 21 #define STL_INTERFACE_HH 22 #include <string> 23 #include <vector> 24 #include "utilities.h" 25 26 using namespace std; 27 28 template<class real> 29 class STL_interface{ 30 31 public : 32 33 typedef real real_type ; 34 35 typedef std::vector<real> stl_vector; 36 typedef std::vector<stl_vector > stl_matrix; 37 38 typedef stl_matrix gene_matrix; 39 40 typedef stl_vector gene_vector; 41 name(void)42 static inline std::string name( void ) 43 { 44 return "STL"; 45 } 46 free_matrix(gene_matrix &,int)47 static void free_matrix(gene_matrix & /*A*/, int /*N*/){} 48 free_vector(gene_vector &)49 static void free_vector(gene_vector & /*B*/){} 50 matrix_from_stl(gene_matrix & A,stl_matrix & A_stl)51 static inline void matrix_from_stl(gene_matrix & A, stl_matrix & A_stl){ 52 A = A_stl; 53 } 54 vector_from_stl(gene_vector & B,stl_vector & B_stl)55 static inline void vector_from_stl(gene_vector & B, stl_vector & B_stl){ 56 B = B_stl; 57 } 58 vector_to_stl(gene_vector & B,stl_vector & B_stl)59 static inline void vector_to_stl(gene_vector & B, stl_vector & B_stl){ 60 B_stl = B ; 61 } 62 63 matrix_to_stl(gene_matrix & A,stl_matrix & A_stl)64 static inline void matrix_to_stl(gene_matrix & A, stl_matrix & A_stl){ 65 A_stl = A ; 66 } 67 copy_vector(const gene_vector & source,gene_vector & cible,int N)68 static inline void copy_vector(const gene_vector & source, gene_vector & cible, int N){ 69 for (int i=0;i<N;i++){ 70 cible[i]=source[i]; 71 } 72 } 73 74 copy_matrix(const gene_matrix & source,gene_matrix & cible,int N)75 static inline void copy_matrix(const gene_matrix & source, gene_matrix & cible, int N){ 76 for (int i=0;i<N;i++) 77 for (int j=0;j<N;j++) 78 cible[i][j]=source[i][j]; 79 } 80 81 // static inline void ata_product(const gene_matrix & A, gene_matrix & X, int N) 82 // { 83 // real somme; 84 // for (int j=0;j<N;j++){ 85 // for (int i=0;i<N;i++){ 86 // somme=0.0; 87 // for (int k=0;k<N;k++) 88 // somme += A[i][k]*A[j][k]; 89 // X[j][i]=somme; 90 // } 91 // } 92 // } 93 aat_product(const gene_matrix & A,gene_matrix & X,int N)94 static inline void aat_product(const gene_matrix & A, gene_matrix & X, int N) 95 { 96 real somme; 97 for (int j=0;j<N;j++){ 98 for (int i=0;i<N;i++){ 99 somme=0.0; 100 if(i>=j) 101 { 102 for (int k=0;k<N;k++){ 103 somme+=A[k][i]*A[k][j]; 104 } 105 X[j][i]=somme; 106 } 107 } 108 } 109 } 110 111 matrix_matrix_product(const gene_matrix & A,const gene_matrix & B,gene_matrix & X,int N)112 static inline void matrix_matrix_product(const gene_matrix & A, const gene_matrix & B, gene_matrix & X, int N) 113 { 114 real somme; 115 for (int j=0;j<N;j++){ 116 for (int i=0;i<N;i++){ 117 somme=0.0; 118 for (int k=0;k<N;k++) 119 somme+=A[k][i]*B[j][k]; 120 X[j][i]=somme; 121 } 122 } 123 } 124 matrix_vector_product(gene_matrix & A,gene_vector & B,gene_vector & X,int N)125 static inline void matrix_vector_product(gene_matrix & A, gene_vector & B, gene_vector & X, int N) 126 { 127 real somme; 128 for (int i=0;i<N;i++){ 129 somme=0.0; 130 for (int j=0;j<N;j++) 131 somme+=A[j][i]*B[j]; 132 X[i]=somme; 133 } 134 } 135 symv(gene_matrix & A,gene_vector & B,gene_vector & X,int N)136 static inline void symv(gene_matrix & A, gene_vector & B, gene_vector & X, int N) 137 { 138 for (int j=0; j<N; ++j) 139 X[j] = 0; 140 for (int j=0; j<N; ++j) 141 { 142 real t1 = B[j]; 143 real t2 = 0; 144 X[j] += t1 * A[j][j]; 145 for (int i=j+1; i<N; ++i) { 146 X[i] += t1 * A[j][i]; 147 t2 += A[j][i] * B[i]; 148 } 149 X[j] += t2; 150 } 151 } 152 syr2(gene_matrix & A,gene_vector & B,gene_vector & X,int N)153 static inline void syr2(gene_matrix & A, gene_vector & B, gene_vector & X, int N) 154 { 155 for (int j=0; j<N; ++j) 156 { 157 for (int i=j; i<N; ++i) 158 A[j][i] += B[i]*X[j] + B[j]*X[i]; 159 } 160 } 161 ger(gene_matrix & A,gene_vector & X,gene_vector & Y,int N)162 static inline void ger(gene_matrix & A, gene_vector & X, gene_vector & Y, int N) 163 { 164 for (int j=0; j<N; ++j) 165 { 166 for (int i=j; i<N; ++i) 167 A[j][i] += X[i]*Y[j]; 168 } 169 } 170 atv_product(gene_matrix & A,gene_vector & B,gene_vector & X,int N)171 static inline void atv_product(gene_matrix & A, gene_vector & B, gene_vector & X, int N) 172 { 173 real somme; 174 for (int i=0;i<N;i++){ 175 somme = 0.0; 176 for (int j=0;j<N;j++) 177 somme += A[i][j]*B[j]; 178 X[i] = somme; 179 } 180 } 181 axpy(real coef,const gene_vector & X,gene_vector & Y,int N)182 static inline void axpy(real coef, const gene_vector & X, gene_vector & Y, int N){ 183 for (int i=0;i<N;i++) 184 Y[i]+=coef*X[i]; 185 } 186 axpby(real a,const gene_vector & X,real b,gene_vector & Y,int N)187 static inline void axpby(real a, const gene_vector & X, real b, gene_vector & Y, int N){ 188 for (int i=0;i<N;i++) 189 Y[i] = a*X[i] + b*Y[i]; 190 } 191 trisolve_lower(const gene_matrix & L,const gene_vector & B,gene_vector & X,int N)192 static inline void trisolve_lower(const gene_matrix & L, const gene_vector & B, gene_vector & X, int N){ 193 copy_vector(B,X,N); 194 for(int i=0; i<N; ++i) 195 { 196 X[i] /= L[i][i]; 197 real tmp = X[i]; 198 for (int j=i+1; j<N; ++j) 199 X[j] -= tmp * L[i][j]; 200 } 201 } 202 norm_diff(const stl_vector & A,const stl_vector & B)203 static inline real norm_diff(const stl_vector & A, const stl_vector & B) 204 { 205 int N=A.size(); 206 real somme=0.0; 207 real somme2=0.0; 208 209 for (int i=0;i<N;i++){ 210 real diff=A[i]-B[i]; 211 somme+=diff*diff; 212 somme2+=A[i]*A[i]; 213 } 214 return somme/somme2; 215 } 216 norm_diff(const stl_matrix & A,const stl_matrix & B)217 static inline real norm_diff(const stl_matrix & A, const stl_matrix & B) 218 { 219 int N=A[0].size(); 220 real somme=0.0; 221 real somme2=0.0; 222 223 for (int i=0;i<N;i++){ 224 for (int j=0;j<N;j++){ 225 real diff=A[i][j] - B[i][j]; 226 somme += diff*diff; 227 somme2 += A[i][j]*A[i][j]; 228 } 229 } 230 231 return somme/somme2; 232 } 233 display_vector(const stl_vector & A)234 static inline void display_vector(const stl_vector & A) 235 { 236 int N=A.size(); 237 for (int i=0;i<N;i++){ 238 INFOS("A["<<i<<"]="<<A[i]<<endl); 239 } 240 } 241 242 }; 243 244 #endif 245